PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DS_E98DB84F1.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 84aa    MW: 9721.19 Da    PI: 9.358
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DS_E98DB84F1.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.24.5e-07264274
                   FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74
                           f n Y+ e GF +r  k++ +  +++ t+++ vC ++gk+ +e+++         + r++C a++++ + +d+
  Traes_7DS_E98DB84F1.1  2 FLNLYSWEHGFGIRYGKNRLN-PDRRKTMQEIVCGCSGKPLRENTR---------SCRCECPAMIRLLRASDN 64
                           8899*************9998.6666899**********9987655.........99********99887654 PP

Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
RFLNLYSWEH GFGIRYGKNR LNPDRRKTMQ EIVCGCSGKP LRENTRSCRC ECPAMIRLLR  60
ASDNGYPDLH LTDKAYTGSI WLLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014753620.15e-26PREDICTED: putative protein FAR1-RELATED SEQUENCE 10
TrEMBLW5IBU85e-58W5IBU8_WHEAT; Uncharacterized protein
STRINGBRADI1G32950.13e-25(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6191991
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]